Lactobacillus crispatus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus crispatus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus crispatus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus crispatus; x__Lactobacillus crispatus FB049-03
NCBI Strain Identifiers FB049-03
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002088015.1)
Genome Characteristics
CheckM Completeness 98.38%
CheckM Contamination 0.09%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 100
N50 Contigs 55,325 bp
Longest Contig 139,577 bp
Scaffold Count 5
N50 Scaffolds 632,608 bp
Longest Scaffold 639,689 bp
Genome Size 2,459,384 bp
Protein Count 2,406
Coding Density 83.28%
GC Percentage 36.95%
Ambiguous Bases N/A
GTDB representative GCA_002088015.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Lact_cris_FB049-03_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463886
Country None
Date 2012-10-11
Genbank Assembly Accession GCA_000301115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,381
Refseq Category na
Seq Rel Date 2012/10/11
Spanned Gaps 95
Species Taxid 47770
SSU Count 3
Submitter Broad Institute
Taxid 883094
Total Gap Length 116534
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGZF00000000.1