Bergeyella zoohelcum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Weeksellaceae; g__Bergeyella; s__Bergeyella zoohelcum
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Bergeyella; s__Bergeyella zoohelcum
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Bergeyella; s__Bergeyella zoohelcum; x__Bergeyella zoohelcum CCUG 30536
NCBI Strain Identifiers CCUG 30536
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000301075.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.25%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 35
N50 Contigs 202,320 bp
Longest Contig 840,246 bp
Scaffold Count 5
N50 Scaffolds 1,627,166 bp
Longest Scaffold 1,627,166 bp
Genome Size 2,499,181 bp
Protein Count 2,324
Coding Density 86.84%
GC Percentage 36.26%
Ambiguous Bases N/A
GTDB representative GCA_000301075.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Berg_zooh_CCUG_30536_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463903
Country None
Date 2012-10-11
Genbank Assembly Accession GCA_000301095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,314
Refseq Category na
Seq Rel Date 2012/10/11
Spanned Gaps 30
Species Taxid 1015
SSU Count 2
Submitter Broad Institute
Taxid 883098
Total Gap Length 55039
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGYB00000000.1