Clostridium_J tunisiense
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_J; s__Clostridium_J tunisiense
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium tunisiense
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium tunisiense; x__Clostridium tunisiense TJ
NCBI Strain Identifiers TJ
GTDB Type Material Designation not type material
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 97.12%
CheckM Contamination 2.88%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 60
N50 Contigs 341,305 bp
Longest Contig 578,329 bp
Scaffold Count 60
N50 Scaffolds 341,305 bp
Longest Scaffold 578,329 bp
Genome Size 4,308,385 bp
Protein Count 3,961
Coding Density 81.15%
GC Percentage 31.24%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM30019v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02472167
Country China: Tianjing
Date 2012-09-28
Genbank Assembly Accession GCA_000300195.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source anaerobic mud
Latitude Longitude None
Molecule Count N/A
CDS Count 3,881
Refseq Category na
Seq Rel Date 2012/09/28
Spanned Gaps 0
Species Taxid 219748
SSU Count 1
Submitter Zhejiang University
Taxid 1233099
Total Gap Length 0
Translation Table 11
tRNA Count (total) 104
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMQH00000000.1