Chlamydophila psittaci
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Verrucomicrobiota_A; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydophila; s__Chlamydophila psittaci
Filtered NCBI Taxonomy d__Bacteria; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia psittaci
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; x__Chlamydia/Chlamydophila group; g__Chlamydia; s__Chlamydia psittaci; x__Chlamydia psittaci WC
NCBI Strain Identifiers WC
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000204255.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 2
N50 Contigs 1,172,265 bp
Longest Contig 1,172,265 bp
Scaffold Count 2
N50 Scaffolds 1,172,265 bp
Longest Scaffold 1,172,265 bp
Genome Size 1,179,818 bp
Protein Count 1,023
Coding Density 90.28%
GC Percentage 39.04%
Ambiguous Bases N/A
GTDB representative GCA_000204255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM29851v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02604212
Country None
Date 2012-9-21
Genbank Assembly Accession GCA_000298515.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source cattle during an outbreak of enteritis
Latitude Longitude None
Molecule Count 2
CDS Count 1,000
Refseq Category na
Seq Rel Date 2012/09/21
Spanned Gaps 0
Species Taxid 83554
SSU Count 1
Submitter University of Maryland, Baltimore
Taxid 1218358
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None