Portiera aleyrodidarum
Isolate LQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Evansiales; f__Evansiaceae; g__Portiera; s__Portiera aleyrodidarum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Oceanospirillales; f__Halomonadaceae; g__Candidatus Portiera; s__Candidatus Portiera aleyrodidarum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Oceanospirillales; f__Halomonadaceae; x__Zymobacter group; x__whitefly endosymbionts; g__Candidatus Portiera; s__Candidatus Portiera aleyrodidarum; x__Candidatus Portiera aleyrodidarum BT-QVLC
NCBI Strain Identifiers BT-QVLC
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000300075.1)
Genome Characteristics
CheckM Completeness 18.92%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 357,472 bp
Longest Contig 357,472 bp
Scaffold Count 1
N50 Scaffolds 357,472 bp
Longest Scaffold 357,472 bp
Genome Size 357,472 bp
Protein Count 266
Coding Density 68.75%
GC Percentage 26.12%
Ambiguous Bases N/A
GTDB representative GCA_000300075.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM29838v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603414
Country None
Date 2012-9-19
Genbank Assembly Accession GCA_000298385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 266
Refseq Category na
Seq Rel Date 2012/09/19
Spanned Gaps 0
Species Taxid 114399
SSU Count 1
Submitter Instituto Cavanilles de Biodiversitat i Biologia Evolutiva (University of Valencia, Spain)
Taxid 1239881
Total Gap Length 0
Translation Table 11
tRNA Count (total) 32
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None