Lactobacillus pasteurii
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus pasteurii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus pasteurii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus pasteurii; x__Lactobacillus pasteurii DSM 23907 = CRBIP 24.76
NCBI Strain Identifiers CRBIP 24.76
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.38%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 5
23S Count 3
tRNA Count 19
Contig Count 30
N50 Contigs 170,009 bp
Longest Contig 313,402 bp
Scaffold Count 30
N50 Scaffolds 170,009 bp
Longest Scaffold 313,402 bp
Genome Size 1,905,398 bp
Protein Count 1,819
Coding Density 87.98%
GC Percentage 38.61%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM29702v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272206
Country None
Date 2012-07-09
Genbank Assembly Accession GCA_000297025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,800
Refseq Category representative genome
Seq Rel Date 2012/07/09
Spanned Gaps 0
Species Taxid 872327
SSU Count 5
Submitter Sycou
Taxid 1423790
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CAKD00000000.1