Lactobacillus hominis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus hominis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus hominis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus hominis; x__Lactobacillus hominis DSM 23910 = CRBIP 24.179
NCBI Strain Identifiers CRBIP 24.179
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 96.52%
CheckM Contamination 0.48%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 36
N50 Contigs 118,998 bp
Longest Contig 365,154 bp
Scaffold Count 36
N50 Scaffolds 118,998 bp
Longest Scaffold 365,154 bp
Genome Size 1,928,135 bp
Protein Count 1,897
Coding Density 90.38%
GC Percentage 35.14%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM29683v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272002
Country None
Date 2012-07-09
Genbank Assembly Accession GCA_000296835.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,866
Refseq Category representative genome
Seq Rel Date 2012/07/09
Spanned Gaps 0
Species Taxid 1203033
SSU Count 1
Submitter Sycou
Taxid 1423758
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CAKE00000000.1