Bradyrhizobium sp000296215
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Xanthobacteraceae; g__Bradyrhizobium; s__Bradyrhizobium sp000296215
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; g__Bradyrhizobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; g__Bradyrhizobium; s__Bradyrhizobium sp. CCGE-LA001
NCBI Strain Identifiers CCGE-LA001
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.7%
CheckM Contamination 0.68%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 7,833,499 bp
Longest Contig 7,833,499 bp
Scaffold Count 1
N50 Scaffolds 7,833,499 bp
Longest Scaffold 7,833,499 bp
Genome Size 7,833,499 bp
Protein Count 7,241
Coding Density 84.94%
GC Percentage 63.57%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM29621v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469422
Country Mexico: Oaxtepec; Morelos
Date 2016-1-25
Genbank Assembly Accession GCA_000296215.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source field-collected nodules from wild Phaseolus microcarpus
Latitude Longitude None
Molecule Count 1
CDS Count 7,180
Refseq Category na
Seq Rel Date 2016/01/25
Spanned Gaps 0
Species Taxid 1223566
SSU Count 1
Submitter Dra. Esperanza Martínez Romero
Taxid 1223566
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None