Enterococcus_B faecium
Isolate HQ 16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium; x__Enterococcus faecium C1904
NCBI Strain Identifiers C1904
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 100.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 246
N50 Contigs 25,211 bp
Longest Contig 119,636 bp
Scaffold Count 212
N50 Scaffolds 31,876 bp
Longest Scaffold 119,989 bp
Genome Size 2,855,424 bp
Protein Count 2,807
Coding Density 85.86%
GC Percentage 37.68%
Ambiguous Bases N/A
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM29531v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02299489
Country None
Date 2012-9-11
Genbank Assembly Accession GCA_000295315.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude None
Molecule Count N/A
CDS Count 2,911
Refseq Category na
Seq Rel Date 2012/09/11
Spanned Gaps 34
Species Taxid 1352
SSU Count 1
Submitter Washington University
Taxid 1134814
Total Gap Length 680
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMBD00000000.1