Enterococcus_B faecium
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium; x__Enterococcus faecium ERV38
NCBI Strain Identifiers ERV38
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 219
N50 Contigs 30,078 bp
Longest Contig 102,251 bp
Scaffold Count 179
N50 Scaffolds 35,517 bp
Longest Scaffold 109,330 bp
Genome Size 2,996,739 bp
Protein Count 2,961
Coding Density 86.11%
GC Percentage 38.03%
Ambiguous Bases N/A
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM29521v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02299500
Country None
Date 2012-9-11
Genbank Assembly Accession GCA_000295215.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 3,047
Refseq Category na
Seq Rel Date 2012/09/11
Spanned Gaps 40
Species Taxid 1352
SSU Count 1
Submitter Washington University
Taxid 1134825
Total Gap Length 800
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMAS00000000.1