Enterococcus_B faecium
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium; x__Enterococcus faecium R499
NCBI Strain Identifiers R499
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 15
Contig Count 233
N50 Contigs 31,014 bp
Longest Contig 93,522 bp
Scaffold Count 202
N50 Scaffolds 34,590 bp
Longest Scaffold 93,522 bp
Genome Size 2,846,776 bp
Protein Count 2,818
Coding Density 85.79%
GC Percentage 37.75%
Ambiguous Bases N/A
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM29487v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02299513
Country None
Date 2012-9-11
Genbank Assembly Accession GCA_000294875.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,917
Refseq Category na
Seq Rel Date 2012/09/11
Spanned Gaps 31
Species Taxid 1352
SSU Count 1
Submitter Washington University
Taxid 1134838
Total Gap Length 620
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMAF00000000.1