Staphylococcus aureus
Isolate HQ 16S/23S 13 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; sb__Staphylococcus aureus subsp. aureus; x__Staphylococcus aureus subsp. aureus CM05
NCBI Strain Identifiers CM05
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.16%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 3
tRNA Count 13
Contig Count 135
N50 Contigs 67,369 bp
Longest Contig 153,195 bp
Scaffold Count 105
N50 Scaffolds 77,773 bp
Longest Scaffold 234,376 bp
Genome Size 2,833,137 bp
Protein Count 2,700
Coding Density 84.20%
GC Percentage 32.70%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM29438v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02299517
Country None
Date 2012-8-30
Genbank Assembly Accession GCA_000294385.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source airway
Latitude Longitude None
Molecule Count N/A
CDS Count 2,927
Refseq Category na
Seq Rel Date 2012/08/30
Spanned Gaps 30
Species Taxid 1280
SSU Count 1
Submitter Washington University
Taxid 1134842
Total Gap Length 718
Translation Table 11
tRNA Count (total) 24
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMAB00000000.1