Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Heidelberg; x__Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN00322
NCBI Strain Identifiers CFSAN00322
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.13%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 74
N50 Contigs 119,452 bp
Longest Contig 314,905 bp
Scaffold Count 74
N50 Scaffolds 119,452 bp
Longest Scaffold 314,905 bp
Genome Size 4,748,949 bp
Protein Count 4,496
Coding Density 87.65%
GC Percentage 52.08%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM29390v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02418812
Country None
Date 2012-08-28
Genbank Assembly Accession GCA_000293905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stool
Latitude Longitude None
Molecule Count N/A
CDS Count 4,803
Refseq Category na
Seq Rel Date 2012/08/28
Spanned Gaps 0
Species Taxid 28901
SSU Count 2
Submitter FDA
Taxid 1182164
Total Gap Length 0
Translation Table 11
tRNA Count (total) 75
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AMBU00000000.1