Bacillus_A mycoides
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae_G; g__Bacillus_A; s__Bacillus_A mycoides
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus cereus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; x__Bacillus cereus group; s__Bacillus cereus; x__Bacillus cereus VD142
NCBI Strain Identifiers VD142
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000832605.1)
Genome Characteristics
CheckM Completeness 98.68%
CheckM Contamination 1.11%
CheckM Strain Heterogeneity 10.0
5S Count 4
16S Count 7
23S Count 6
tRNA Count 20
Contig Count 62
N50 Contigs 175,525 bp
Longest Contig 611,494 bp
Scaffold Count 20
N50 Scaffolds 1,585,431 bp
Longest Scaffold 1,720,989 bp
Genome Size 5,923,913 bp
Protein Count 5,872
Coding Density 81.85%
GC Percentage 35.18%
Ambiguous Bases N/A
GTDB representative GCA_000832605.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Baci_cere_VD142_V2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02596797
Country None
Date 2013-6-18
Genbank Assembly Accession GCA_000290975.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,952
Refseq Category na
Seq Rel Date 2013/06/18
Spanned Gaps 42
Species Taxid 1396
SSU Count 8
Submitter Broad Institute
Taxid 718224
Total Gap Length 31790
Translation Table 11
tRNA Count (total) 78
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHCL00000000.2