Streptococcus agalactiae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae; x__Streptococcus agalactiae CCUG 37737
NCBI Strain Identifiers CCUG 37737
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.53%
CheckM Strain Heterogeneity 50.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 47
N50 Contigs 115,926 bp
Longest Contig 321,770 bp
Scaffold Count 43
N50 Scaffolds 115,926 bp
Longest Scaffold 321,770 bp
Genome Size 2,193,974 bp
Protein Count 2,180
Coding Density 89.08%
GC Percentage 35.33%
Ambiguous Bases 1
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM28875v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00991057
Country None
Date 2012-08-15
Genbank Assembly Accession GCA_000288755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,226
Refseq Category na
Seq Rel Date 2012/08/15
Spanned Gaps 4
Species Taxid 1311
SSU Count 1
Submitter The J. Craig Venter Institute
Taxid 1154811
Total Gap Length 46
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALQO00000000.1