Streptococcus agalactiae
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae; x__Streptococcus agalactiae str. Gottschalk 1003A
NCBI Strain Identifiers Gottschalk 1003A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 5
23S Count 1
tRNA Count 15
Contig Count 46
N50 Contigs 82,303 bp
Longest Contig 252,594 bp
Scaffold Count 41
N50 Scaffolds 82,303 bp
Longest Scaffold 252,641 bp
Genome Size 2,153,312 bp
Protein Count 2,139
Coding Density 88.99%
GC Percentage 35.32%
Ambiguous Bases 17
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM28807v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00991154
Country None
Date 2012-08-15
Genbank Assembly Accession GCA_000288075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,164
Refseq Category na
Seq Rel Date 2012/08/15
Spanned Gaps 5
Species Taxid 1311
SSU Count 5
Submitter The J. Craig Venter Institute
Taxid 1154888
Total Gap Length 70
Translation Table 11
tRNA Count (total) 31
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALSI00000000.1