Streptococcus agalactiae
Isolate HQ 5S/16S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae; x__Streptococcus agalactiae MRI Z1-211
NCBI Strain Identifiers MRI Z1-211
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 99.65%
CheckM Contamination 0.53%
CheckM Strain Heterogeneity 50.0
5S Count 3
16S Count 2
23S Count 0
tRNA Count 16
Contig Count 21
N50 Contigs 140,213 bp
Longest Contig 592,287 bp
Scaffold Count 21
N50 Scaffolds 140,213 bp
Longest Scaffold 592,287 bp
Genome Size 2,120,507 bp
Protein Count 2,103
Coding Density 89.37%
GC Percentage 35.36%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM28795v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00993326
Country None
Date 2012-08-15
Genbank Assembly Accession GCA_000287955.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,144
Refseq Category na
Seq Rel Date 2012/08/15
Spanned Gaps 0
Species Taxid 1311
SSU Count 2
Submitter The J. Craig Venter Institute
Taxid 1154874
Total Gap Length 0
Translation Table 11
tRNA Count (total) 32
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALSB00000000.1