Stenotrophomonas maltophilia
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia; x__Stenotrophomonas maltophilia Ab55555
NCBI Strain Identifiers Ab55555
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900186865.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.03%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 21
N50 Contigs 602,979 bp
Longest Contig 1,027,897 bp
Scaffold Count 6
N50 Scaffolds 4,125,619 bp
Longest Scaffold 4,125,619 bp
Genome Size 4,918,930 bp
Protein Count 4,460
Coding Density 88.49%
GC Percentage 66.12%
Ambiguous Bases N/A
GTDB representative GCA_900186865.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Sten_malt_Ab55555_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02596924
Country None
Date 2012-8-15
Genbank Assembly Accession GCA_000287935.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,488
Refseq Category na
Seq Rel Date 2012/08/15
Spanned Gaps 15
Species Taxid 40324
SSU Count 2
Submitter Broad Institute
Taxid 1183154
Total Gap Length 4422
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALOG00000000.1