Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa; x__Pseudomonas aeruginosa N002
NCBI Strain Identifiers N002
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.66%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 6
tRNA Count 20
Contig Count 235
N50 Contigs 63,467 bp
Longest Contig 214,048 bp
Scaffold Count 235
N50 Scaffolds 63,467 bp
Longest Scaffold 214,048 bp
Genome Size 6,050,470 bp
Protein Count 5,599
Coding Density 89.89%
GC Percentage 66.82%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM28781v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00996515
Country India: Lakowa Geleky; Assam
Date 2012-11-27
Genbank Assembly Accession GCA_000287815.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source crude oil contaminated soil
Latitude Longitude None
Molecule Count N/A
CDS Count 5,747
Refseq Category na
Seq Rel Date 2012/11/27
Spanned Gaps 0
Species Taxid 287
SSU Count 4
Submitter CSIR-NEIST, Jorhat
Taxid 1194669
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALBV00000000.2