Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus oralis_Y
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus oralis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus oralis; x__Streptococcus oralis SK304
NCBI Strain Identifiers SK304
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.77%
CheckM Contamination 0.6%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 0
tRNA Count 17
Contig Count 25
N50 Contigs 406,364 bp
Longest Contig 745,852 bp
Scaffold Count 25
N50 Scaffolds 406,364 bp
Longest Scaffold 745,852 bp
Genome Size 2,020,585 bp
Protein Count 1,995
Coding Density 90.25%
GC Percentage 40.69%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name SoralisSK304v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00829137
Country None
Date 2012-08-13
Genbank Assembly Accession GCA_000287715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,012
Refseq Category na
Seq Rel Date 2012/08/13
Spanned Gaps 0
Species Taxid 1303
SSU Count 1
Submitter JCVI
Taxid 1161421
Total Gap Length 0
Translation Table 11
tRNA Count (total) 31
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALJN00000000.1