Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella buccae
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella sp. MSX73
NCBI Strain Identifiers MSX73
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000184945.1)
Genome Characteristics
CheckM Completeness 99.31%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 0
23S Count 3
tRNA Count 18
Contig Count 47
N50 Contigs 127,647 bp
Longest Contig 307,266 bp
Scaffold Count 47
N50 Scaffolds 127,647 bp
Longest Scaffold 307,266 bp
Genome Size 3,164,912 bp
Protein Count 2,591
Coding Density 87.41%
GC Percentage 51.18%
Ambiguous Bases N/A
GTDB representative GCA_000184945.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name PspMSX73v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00828778
Country None
Date 2012-08-13
Genbank Assembly Accession GCA_000287635.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 2,611
Refseq Category na
Seq Rel Date 2012/08/13
Spanned Gaps 0
Species Taxid 1032506
SSU Count 0
Submitter J. Craig Venter Institute
Taxid 1032506
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALJQ00000000.1