Komagataeibacter europaeus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Komagataeibacter; s__Komagataeibacter europaeus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Komagataeibacter; s__Komagataeibacter europaeus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Komagataeibacter; s__Komagataeibacter europaeus; x__Komagataeibacter europaeus 5P3
NCBI Strain Identifiers 5P3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000285295.1)
Genome Characteristics
CheckM Completeness 99.5%
CheckM Contamination 1.49%
CheckM Strain Heterogeneity 100.0
5S Count 5
16S Count 10
23S Count 5
tRNA Count 20
Contig Count 271
N50 Contigs 39,102 bp
Longest Contig 341,171 bp
Scaffold Count 256
N50 Scaffolds 39,631 bp
Longest Scaffold 341,171 bp
Genome Size 3,989,313 bp
Protein Count 3,916
Coding Density 86.62%
GC Percentage 61.49%
Ambiguous Bases 93
GTDB representative GCA_000285295.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM28533v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272389
Country None
Date 2011-04-01
Genbank Assembly Accession GCA_000285335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,875
Refseq Category na
Seq Rel Date 2011/04/01
Spanned Gaps 15
Species Taxid 33995
SSU Count 10
Submitter Vital-IT - Swiss Institute of Bioinformatics
Taxid 940285
Total Gap Length 430
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CADS00000000.1