Lactococcus lactis
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis; sb__Lactococcus lactis subsp. lactis; x__Lactococcus lactis subsp. lactis CNCM I-1631
NCBI Strain Identifiers CNCM I-1631
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900099625.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 131
N50 Contigs 55,851 bp
Longest Contig 185,745 bp
Scaffold Count 131
N50 Scaffolds 55,851 bp
Longest Scaffold 185,745 bp
Genome Size 2,511,332 bp
Protein Count 2,587
Coding Density 86.76%
GC Percentage 34.94%
Ambiguous Bases 12
GTDB representative GCA_900099625.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM28473v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436934
Country None
Date 2011-10-28
Genbank Assembly Accession GCA_000284735.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,558
Refseq Category na
Seq Rel Date 2011/10/28
Spanned Gaps 0
Species Taxid 1358
SSU Count 1
Submitter Washington University School of Medicine Center for Genome Sciences and Systems Biology
Taxid 1042402
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGHX00000000.1