Marinobacter hydrocarbonoclasticus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Oleiphilaceae; g__Marinobacter; s__Marinobacter hydrocarbonoclasticus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Alteromonadaceae; g__Marinobacter; s__Marinobacter hydrocarbonoclasticus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Alteromonadaceae; g__Marinobacter; s__Marinobacter hydrocarbonoclasticus; x__Marinobacter hydrocarbonoclasticus ATCC 49840
NCBI Strain Identifiers ATCC 49840
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (22 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.07%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 3,989,480 bp
Longest Contig 3,989,480 bp
Scaffold Count 1
N50 Scaffolds 3,989,480 bp
Longest Scaffold 3,989,480 bp
Genome Size 3,989,480 bp
Protein Count 3,651
Coding Density 91.59%
GC Percentage 57.43%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM28461v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272383
Country None
Date 2012-3-27
Genbank Assembly Accession GCA_000284615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 3,634
Refseq Category representative genome
Seq Rel Date 2012/03/27
Spanned Gaps 0
Species Taxid 2743
SSU Count 3
Submitter Genoscope CEA
Taxid 1163748
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None