Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli LF82
NCBI Strain Identifiers LF82
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003697165.2)
Genome Characteristics
CheckM Completeness 99.91%
CheckM Contamination 0.14%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 1
N50 Contigs 4,773,108 bp
Longest Contig 4,773,108 bp
Scaffold Count 1
N50 Scaffolds 4,773,108 bp
Longest Scaffold 4,773,108 bp
Genome Size 4,773,108 bp
Protein Count 4,412
Coding Density 88.29%
GC Percentage 50.70%
Ambiguous Bases N/A
GTDB representative GCA_003697165.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM28449v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3138414
Country None
Date 2009-1-27
Genbank Assembly Accession GCA_000284495.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 4,742
Refseq Category na
Seq Rel Date 2009/01/27
Spanned Gaps 0
Species Taxid 562
SSU Count 7
Submitter Genoscope
Taxid 591946
Total Gap Length 0
Translation Table 11
tRNA Count (total) 85
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None