Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Pantoea; s__Pantoea ananatis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea ananatis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea ananatis; x__Pantoea ananatis LMG 5342
NCBI Strain Identifiers LMG 5342
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000710035.1)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 2
N50 Contigs 4,605,545 bp
Longest Contig 4,605,545 bp
Scaffold Count 2
N50 Scaffolds 4,605,545 bp
Longest Scaffold 4,605,545 bp
Genome Size 4,908,144 bp
Protein Count 4,528
Coding Density 86.06%
GC Percentage 53.33%
Ambiguous Bases N/A
GTDB representative GCA_000710035.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM28387v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272583
Country None
Date 2011-12-21
Genbank Assembly Accession GCA_000283875.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 4,507
Refseq Category na
Seq Rel Date 2011/12/21
Spanned Gaps 0
Species Taxid 553
SSU Count 7
Submitter Center for Biotechnology
Taxid 1123863
Total Gap Length 0
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None