Tetragenococcus halophilus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Tetragenococcus; s__Tetragenococcus halophilus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Tetragenococcus; s__Tetragenococcus halophilus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Tetragenococcus; s__Tetragenococcus halophilus; x__Tetragenococcus halophilus NBRC 12172
NCBI Strain Identifiers NBRC 12172
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003841405.1)
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 1
N50 Contigs 2,562,720 bp
Longest Contig 2,562,720 bp
Scaffold Count 1
N50 Scaffolds 2,562,720 bp
Longest Scaffold 2,562,720 bp
Genome Size 2,562,720 bp
Protein Count 2,517
Coding Density 85.68%
GC Percentage 36.04%
Ambiguous Bases N/A
GTDB representative GCA_003841405.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM28361v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00061109
Country None
Date 2011-9-30
Genbank Assembly Accession GCA_000283615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 2,469
Refseq Category representative genome
Seq Rel Date 2011/09/30
Spanned Gaps 0
Species Taxid 51669
SSU Count 5
Submitter National Institute of Technology and Evaluation
Taxid 945021
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None