Pseudomonas_E sp000282535
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E sp000282535
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. GM84
NCBI Strain Identifiers GM84
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.53%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 384
N50 Contigs 24,795 bp
Longest Contig 107,668 bp
Scaffold Count 384
N50 Scaffolds 24,795 bp
Longest Scaffold 107,668 bp
Genome Size 5,818,772 bp
Protein Count 5,239
Coding Density 88.95%
GC Percentage 63.15%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name GM84.fsa
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00839651
Country None
Date 2012-07-27
Genbank Assembly Accession GCA_000282535.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,254
Refseq Category na
Seq Rel Date 2012/07/27
Spanned Gaps 0
Species Taxid 1144340
SSU Count 1
Submitter Oak Ridge National Lab
Taxid 1144340
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKJC00000000.1