Pseudomonas_E sp000282275
Isolate HQ 5S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E sp000282275
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. GM30
NCBI Strain Identifiers GM30
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.36%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 0
23S Count 1
tRNA Count 19
Contig Count 32
N50 Contigs 298,687 bp
Longest Contig 543,046 bp
Scaffold Count 32
N50 Scaffolds 298,687 bp
Longest Scaffold 543,046 bp
Genome Size 6,152,442 bp
Protein Count 5,521
Coding Density 88.06%
GC Percentage 60.28%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Pseudomonas.strGM30_v2.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00839637
Country None
Date 2014-01-28
Genbank Assembly Accession GCA_000282275.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,565
Refseq Category na
Seq Rel Date 2014/01/28
Spanned Gaps 0
Species Taxid 1144328
SSU Count 0
Submitter Oak Ridge National Lab
Taxid 1144328
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKJP00000000.2