Pseudomonas_E sp900187605
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E sp900187605
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. GM24
NCBI Strain Identifiers GM24
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187605.1)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.05%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 449
N50 Contigs 30,528 bp
Longest Contig 107,081 bp
Scaffold Count 399
N50 Scaffolds 32,656 bp
Longest Scaffold 107,081 bp
Genome Size 6,517,063 bp
Protein Count 5,824
Coding Density 88.69%
GC Percentage 59.14%
Ambiguous Bases 65
GTDB representative GCA_900187605.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Pseudomonas.strGM24_v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00839634
Country None
Date 2012-07-27
Genbank Assembly Accession GCA_000282235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,833
Refseq Category na
Seq Rel Date 2012/07/27
Spanned Gaps 50
Species Taxid 1144326
SSU Count 1
Submitter Oak Ridge National Lab
Taxid 1144326
Total Gap Length 1043
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKJR00000000.1