Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; sb__Klebsiella pneumoniae subsp. pneumoniae; x__Klebsiella pneumoniae subsp. pneumoniae KPNIH21
NCBI Strain Identifiers KPNIH21
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 99.98%
CheckM Contamination 0.13%
CheckM Strain Heterogeneity 33.33
5S Count 11
16S Count 5
23S Count 11
tRNA Count 20
Contig Count 178
N50 Contigs 117,020 bp
Longest Contig 329,700 bp
Scaffold Count 178
N50 Scaffolds 117,020 bp
Longest Scaffold 329,700 bp
Genome Size 5,757,750 bp
Protein Count 5,548
Coding Density 87.55%
GC Percentage 57.19%
Ambiguous Bases 5
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name KPNIH21_1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01057652
Country USA
Date 2012-07-24
Genbank Assembly Accession GCA_000281495.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rectal swab
Latitude Longitude None
Molecule Count N/A
CDS Count 5,946
Refseq Category na
Seq Rel Date 2012/07/24
Spanned Gaps 0
Species Taxid 573
SSU Count 9
Submitter NISC
Taxid 1168062
Total Gap Length 0
Translation Table 11
tRNA Count (total) 85
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKAL00000000.1