Rickettsia prowazekii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia prowazekii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; g__Rickettsia; s__Rickettsia prowazekii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rickettsiales; f__Rickettsiaceae; x__Rickettsieae; g__Rickettsia; x__typhus group; s__Rickettsia prowazekii; x__Rickettsia prowazekii str. Dachau
NCBI Strain Identifiers Dachau
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000367405.1)
Genome Characteristics
CheckM Completeness 98.55%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 2
N50 Contigs 941,223 bp
Longest Contig 941,223 bp
Scaffold Count 1
N50 Scaffolds 1,109,051 bp
Longest Scaffold 1,109,051 bp
Genome Size 1,109,051 bp
Protein Count 890
Coding Density 76.65%
GC Percentage 29.01%
Ambiguous Bases 5
GTDB representative GCA_000367405.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM27722v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603545
Country None
Date 2012-3-21
Genbank Assembly Accession GCA_000277225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 878
Refseq Category na
Seq Rel Date 2012/03/21
Spanned Gaps 1
Species Taxid 782
SSU Count 1
Submitter Los Alamos National Laboratory
Taxid 1105097
Total Gap Length 100
Translation Table 11
tRNA Count (total) 33
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None