Mycobacterium intracellulare
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium intracellulare
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium intracellulare
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; x__Mycobacterium avium complex (MAC); s__Mycobacterium intracellulare; x__Mycobacterium intracellulare ATCC 13950
NCBI Strain Identifiers ATCC 13950
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (49 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 5,402,402 bp
Longest Contig 5,402,402 bp
Scaffold Count 1
N50 Scaffolds 5,402,402 bp
Longest Scaffold 5,402,402 bp
Genome Size 5,402,402 bp
Protein Count 5,036
Coding Density 91.56%
GC Percentage 68.10%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM27712v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603186
Country South Korea: Seoul
Date 2012-2-29
Genbank Assembly Accession GCA_000277125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source clinical isolates from a Korean pulmonary patient; male; 64 age; Asan medical center
Latitude Longitude None
Molecule Count 1
CDS Count 5,068
Refseq Category representative genome
Seq Rel Date 2012/02/29
Spanned Gaps 0
Species Taxid 1767
SSU Count 1
Submitter Department of Microbiology and Immunology, Seoul National University
Taxid 487521
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None