Liquorilactobacillus mali
Isolate MQ 5S/16S/23S 13 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Liquorilactobacillus; s__Liquorilactobacillus mali
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus mali
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus mali; x__Lactobacillus mali KCTC 3596 = DSM 20444
NCBI Strain Identifiers DSM 20444
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000260415.1)
Genome Characteristics
CheckM Completeness 88.12%
CheckM Contamination 0.56%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 13
Contig Count 196
N50 Contigs 24,444 bp
Longest Contig 51,309 bp
Scaffold Count 196
N50 Scaffolds 24,444 bp
Longest Scaffold 51,309 bp
Genome Size 2,149,363 bp
Protein Count 2,177
Coding Density 86.51%
GC Percentage 36.23%
Ambiguous Bases N/A
GTDB representative GCA_000260415.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name LmaliDSM20444T
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471469
Country None
Date 2012-07-09
Genbank Assembly Accession GCA_000276905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,141
Refseq Category na
Seq Rel Date 2012/07/09
Spanned Gaps 0
Species Taxid 1618
SSU Count 1
Submitter Microbiology Dept, University College Cork
Taxid 1046596
Total Gap Length 0
Translation Table 11
tRNA Count (total) 27
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AKKT00000000.1