Staphylococcus epidermidis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis; x__Staphylococcus epidermidis NIH08001
NCBI Strain Identifiers NIH08001
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742205.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 7
23S Count 4
tRNA Count 20
Contig Count 68
N50 Contigs 88,613 bp
Longest Contig 328,303 bp
Scaffold Count 68
N50 Scaffolds 88,613 bp
Longest Scaffold 328,303 bp
Genome Size 2,509,449 bp
Protein Count 2,373
Coding Density 83.49%
GC Percentage 32.14%
Ambiguous Bases N/A
GTDB representative GCA_006742205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM27606v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00993450
Country USA
Date 2012-07-09
Genbank Assembly Accession GCA_000276065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude None
Molecule Count N/A
CDS Count 2,454
Refseq Category na
Seq Rel Date 2012/07/09
Spanned Gaps 0
Species Taxid 1282
SSU Count 7
Submitter NIH-NISC
Taxid 1155135
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKHG00000000.1