Helicobacter pylori_BU
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori_BU
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori; x__Helicobacter pylori Hp M9
NCBI Strain Identifiers Hp M9
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900120335.1)
Genome Characteristics
CheckM Completeness 99.36%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 10
N50 Contigs 219,481 bp
Longest Contig 396,867 bp
Scaffold Count 10
N50 Scaffolds 219,481 bp
Longest Scaffold 396,867 bp
Genome Size 1,658,934 bp
Protein Count 1,551
Coding Density 90.47%
GC Percentage 39.15%
Ambiguous Bases N/A
GTDB representative GCA_900120335.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM27548v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00778882
Country USA: Cleveland; OH
Date 2012-6-28
Genbank Assembly Accession GCA_000275485.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,598
Refseq Category na
Seq Rel Date 2012/06/28
Spanned Gaps 0
Species Taxid 210
SSU Count 3
Submitter Institute for Genome Sciences
Taxid 992125
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKQT00000000.1