Helicobacter pylori_BU
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori_BU
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori; x__Helicobacter pylori Hp P-41
NCBI Strain Identifiers Hp P-41
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900120335.1)
Genome Characteristics
CheckM Completeness 99.57%
CheckM Contamination 0.14%
CheckM Strain Heterogeneity 100.0
5S Count 0
16S Count 3
23S Count 4
tRNA Count 20
Contig Count 9
N50 Contigs 363,756 bp
Longest Contig 648,538 bp
Scaffold Count 9
N50 Scaffolds 363,756 bp
Longest Scaffold 648,538 bp
Genome Size 1,712,112 bp
Protein Count 1,607
Coding Density 89.82%
GC Percentage 39.12%
Ambiguous Bases 1
GTDB representative GCA_900120335.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM27542v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00778891
Country None
Date 2012-6-28
Genbank Assembly Accession GCA_000275425.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,623
Refseq Category na
Seq Rel Date 2012/06/28
Spanned Gaps 0
Species Taxid 210
SSU Count 3
Submitter Institute for Genome Sciences
Taxid 992088
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKPV00000000.1