Helicobacter pylori_BU
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori_BU
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori; x__Helicobacter pylori Hp A-17
NCBI Strain Identifiers Hp A-17
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900120335.1)
Genome Characteristics
CheckM Completeness 99.42%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 5
N50 Contigs 1,024,601 bp
Longest Contig 1,024,601 bp
Scaffold Count 5
N50 Scaffolds 1,024,601 bp
Longest Scaffold 1,024,601 bp
Genome Size 1,636,618 bp
Protein Count 1,534
Coding Density 90.42%
GC Percentage 39.22%
Ambiguous Bases N/A
GTDB representative GCA_900120335.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM27526v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00778857
Country USA: Cleveland; OH
Date 2012-6-28
Genbank Assembly Accession GCA_000275265.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,553
Refseq Category na
Seq Rel Date 2012/06/28
Spanned Gaps 0
Species Taxid 210
SSU Count 3
Submitter Institute for Genome Sciences
Taxid 992036
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKOD00000000.1