Bacteroides fragilis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides fragilis; x__Bacteroides fragilis CL07T12C05
NCBI Strain Identifiers CL07T12C05
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000025985.1)
Genome Characteristics
CheckM Completeness 99.26%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 8
tRNA Count 20
Contig Count 35
N50 Contigs 458,158 bp
Longest Contig 984,935 bp
Scaffold Count 11
N50 Scaffolds 3,416,594 bp
Longest Scaffold 3,416,594 bp
Genome Size 5,444,546 bp
Protein Count 4,600
Coding Density 88.80%
GC Percentage 43.62%
Ambiguous Bases N/A
GTDB representative GCA_000025985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Bact_frag_CL07T12C05_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463926
Country None
Date 2012-7-23
Genbank Assembly Accession GCA_000273155.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 4,807
Refseq Category na
Seq Rel Date 2012/07/23
Spanned Gaps 24
Species Taxid 817
SSU Count 6
Submitter Broad Institute
Taxid 997883
Total Gap Length 14319
Translation Table 11
tRNA Count (total) 80
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGXN00000000.1