Mycobacterium abscessus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium abscessus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__Mycobacteroides abscessus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__Mycobacteroides abscessus; x__Mycobacteroides abscessus 4S-0303
NCBI Strain Identifiers 4S-0303
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000069185.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 8
N50 Contigs 1,039,762 bp
Longest Contig 1,976,250 bp
Scaffold Count 8
N50 Scaffolds 1,039,762 bp
Longest Scaffold 1,976,250 bp
Genome Size 4,864,284 bp
Protein Count 4,753
Coding Density 92.66%
GC Percentage 64.21%
Ambiguous Bases N/A
GTDB representative GCA_000069185.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM27112v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00728581
Country None
Date 2012-06-19
Genbank Assembly Accession GCA_000271125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,795
Refseq Category na
Seq Rel Date 2012/06/19
Spanned Gaps 0
Species Taxid 36809
SSU Count 1
Submitter Institute for Genome Sciences
Taxid 1001722
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKTU00000000.1