Mycobacterium abscessus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium abscessus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__Mycobacteroides abscessus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__Mycobacteroides abscessus; x__Mycobacteroides abscessus 3A-0122-S
NCBI Strain Identifiers 3A-0122-S
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000069185.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 18
N50 Contigs 683,876 bp
Longest Contig 1,521,513 bp
Scaffold Count 18
N50 Scaffolds 683,876 bp
Longest Scaffold 1,521,513 bp
Genome Size 5,233,665 bp
Protein Count 5,218
Coding Density 92.70%
GC Percentage 64.12%
Ambiguous Bases N/A
GTDB representative GCA_000069185.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM27058v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00672648
Country None
Date 2012-06-19
Genbank Assembly Accession GCA_000270585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,254
Refseq Category na
Seq Rel Date 2012/06/19
Spanned Gaps 0
Species Taxid 36809
SSU Count 1
Submitter Institute for Genome Sciences
Taxid 1001716
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKUZ00000000.1