Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia pestis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia pestis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; x__Yersinia pseudotuberculosis complex; s__Yersinia pestis; x__Yersinia pestis PY-95
NCBI Strain Identifiers PY-95
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900460465.1)
Genome Characteristics
CheckM Completeness 99.7%
CheckM Contamination 1.43%
CheckM Strain Heterogeneity 30.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 456
N50 Contigs 19,472 bp
Longest Contig 81,539 bp
Scaffold Count 456
N50 Scaffolds 19,472 bp
Longest Scaffold 81,539 bp
Genome Size 4,687,267 bp
Protein Count 4,405
Coding Density 83.79%
GC Percentage 47.46%
Ambiguous Bases N/A
GTDB representative GCA_900460465.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM26944v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02141498
Country Peru:Chota
Date 2012-06-15
Genbank Assembly Accession GCA_000269445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood [ENVO:02000020]
Latitude Longitude None
Molecule Count N/A
CDS Count 4,547
Refseq Category na
Seq Rel Date 2012/06/15
Spanned Gaps 0
Species Taxid 632
SSU Count 1
Submitter Institute for Genome Sciences
Taxid 992177
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKTK00000000.1