Escherichia dysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli FRIK1990
NCBI Strain Identifiers FRIK1990
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.89%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 628
N50 Contigs 79,309 bp
Longest Contig 202,096 bp
Scaffold Count 569
N50 Scaffolds 85,693 bp
Longest Scaffold 240,271 bp
Genome Size 5,518,143 bp
Protein Count 5,651
Coding Density 87.26%
GC Percentage 50.34%
Ambiguous Bases N/A
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM26796v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02435934
Country USA
Date 2012-6-15
Genbank Assembly Accession GCA_000267965.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,158
Refseq Category na
Seq Rel Date 2012/06/15
Spanned Gaps 59
Species Taxid 562
SSU Count 2
Submitter Institute for Genome Sciences
Taxid 1005478
Total Gap Length 4061
Translation Table 11
tRNA Count (total) 87
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKLA00000000.1