Escherichia dysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli FDA517
NCBI Strain Identifiers FDA517
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.89%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 532
N50 Contigs 101,477 bp
Longest Contig 308,206 bp
Scaffold Count 487
N50 Scaffolds 106,781 bp
Longest Scaffold 314,079 bp
Genome Size 5,522,241 bp
Protein Count 5,625
Coding Density 87.28%
GC Percentage 50.24%
Ambiguous Bases N/A
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM26748v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02435933
Country USA
Date 2012-6-15
Genbank Assembly Accession GCA_000267485.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,094
Refseq Category na
Seq Rel Date 2012/06/15
Spanned Gaps 45
Species Taxid 562
SSU Count 2
Submitter Institute for Genome Sciences
Taxid 1005473
Total Gap Length 2872
Translation Table 11
tRNA Count (total) 94
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKKX00000000.1