Escherichia dysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli TW10246
NCBI Strain Identifiers TW10246
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 12
16S Count 10
23S Count 13
tRNA Count 20
Contig Count 47
N50 Contigs 347,886 bp
Longest Contig 730,669 bp
Scaffold Count 47
N50 Scaffolds 347,886 bp
Longest Scaffold 730,669 bp
Genome Size 5,446,604 bp
Protein Count 5,223
Coding Density 86.74%
GC Percentage 50.27%
Ambiguous Bases N/A
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM26714v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02435921
Country USA
Date 2012-06-12
Genbank Assembly Accession GCA_000267145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,666
Refseq Category na
Seq Rel Date 2012/06/12
Spanned Gaps 0
Species Taxid 562
SSU Count 11
Submitter Institute for Genome Sciences
Taxid 1005517
Total Gap Length 0
Translation Table 11
tRNA Count (total) 107
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKLV00000000.1