Escherichia dysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli PA40
NCBI Strain Identifiers PA40
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 7
23S Count 11
tRNA Count 20
Contig Count 66
N50 Contigs 286,795 bp
Longest Contig 549,816 bp
Scaffold Count 66
N50 Scaffolds 286,795 bp
Longest Scaffold 549,816 bp
Genome Size 5,525,229 bp
Protein Count 5,429
Coding Density 87.16%
GC Percentage 50.16%
Ambiguous Bases N/A
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM26710v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00760005
Country USA
Date 2012-06-12
Genbank Assembly Accession GCA_000267105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,904
Refseq Category na
Seq Rel Date 2012/06/12
Spanned Gaps 0
Species Taxid 562
SSU Count 7
Submitter Institute for Genome Sciences
Taxid 1005508
Total Gap Length 0
Translation Table 11
tRNA Count (total) 99
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKLQ00000000.1