Escherichia dysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli FDA505
NCBI Strain Identifiers FDA505
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 539
N50 Contigs 86,481 bp
Longest Contig 251,521 bp
Scaffold Count 486
N50 Scaffolds 104,172 bp
Longest Scaffold 251,521 bp
Genome Size 5,349,086 bp
Protein Count 5,378
Coding Density 87.33%
GC Percentage 50.33%
Ambiguous Bases N/A
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM26700v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02435932
Country USA
Date 2012-6-15
Genbank Assembly Accession GCA_000267005.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,865
Refseq Category na
Seq Rel Date 2012/06/15
Spanned Gaps 53
Species Taxid 562
SSU Count 2
Submitter Institute for Genome Sciences
Taxid 1005471
Total Gap Length 2013
Translation Table 11
tRNA Count (total) 90
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AKKW00000000.1