Aequorivita sublithincola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Aequorivita; s__Aequorivita sublithincola
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Aequorivita; s__Aequorivita sublithincola
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Aequorivita; s__Aequorivita sublithincola; x__Aequorivita sublithincola DSM 14238
NCBI Strain Identifiers DSM 14238
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.49%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 3,520,671 bp
Longest Contig 3,520,671 bp
Scaffold Count 1
N50 Scaffolds 3,520,671 bp
Longest Scaffold 3,520,671 bp
Genome Size 3,520,671 bp
Protein Count 3,200
Coding Density 89.84%
GC Percentage 36.19%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM26538v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02232006
Country None
Date 2012-6-8
Genbank Assembly Accession GCA_000265385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sea water
Latitude Longitude 68.582 S 77.966 E
Molecule Count 1
CDS Count 3,172
Refseq Category representative genome
Seq Rel Date 2012/06/08
Spanned Gaps 0
Species Taxid 101385
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 746697
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None