Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia flexneri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli 75
NCBI Strain Identifiers 75
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002950215.1)
Genome Characteristics
CheckM Completeness 99.5%
CheckM Contamination 0.36%
CheckM Strain Heterogeneity 16.67
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 254
N50 Contigs 46,457 bp
Longest Contig 199,473 bp
Scaffold Count 254
N50 Scaffolds 46,457 bp
Longest Scaffold 199,473 bp
Genome Size 4,598,368 bp
Protein Count 4,451
Coding Density 88.44%
GC Percentage 50.70%
Ambiguous Bases N/A
GTDB representative GCA_002950215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM26415v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02428993
Country USA
Date 2012-05-23
Genbank Assembly Accession GCA_000264155.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source ileum
Latitude Longitude None
Molecule Count N/A
CDS Count 4,741
Refseq Category na
Seq Rel Date 2012/05/23
Spanned Gaps 0
Species Taxid 562
SSU Count 1
Submitter Cornell University
Taxid 752788
Total Gap Length 0
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AJWT00000000.1