Bifidobacterium vaginale
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium vaginale
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Gardnerella; s__Gardnerella vaginalis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Gardnerella; s__Gardnerella vaginalis; x__Gardnerella vaginalis 284V
NCBI Strain Identifiers 284V
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001042655.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 16
N50 Contigs 393,577 bp
Longest Contig 456,246 bp
Scaffold Count 16
N50 Scaffolds 393,577 bp
Longest Scaffold 456,246 bp
Genome Size 1,650,838 bp
Protein Count 1,258
Coding Density 87.72%
GC Percentage 41.18%
Ambiguous Bases N/A
GTDB representative GCA_001042655.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM26343v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02393773
Country None
Date 2012-05-21
Genbank Assembly Accession GCA_000263435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,333
Refseq Category na
Seq Rel Date 2012/05/21
Spanned Gaps 0
Species Taxid 2702
SSU Count 2
Submitter Center for Genomic Sciences, Allegheny-Singer Research Institute
Taxid 698950
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADEL00000000.1